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研究者がActive Inferenceと自由エネルギー原理の研究分野のcanonical文献、証據スコア、および構造化分析を寻求している。

文献

Active Inference Meta-Analyseプロジェクトからキュレートされた参考文献と構造化された出力 — 817の論文、8つの仮説、5つのトピック、8つのサブフィールド、そして71のキュレートされた参考文献。

このページでは、Active Inference Meta-Analysisプロジェクトの完全な構造化出力が提示されています —— 2005年から2026年のActive Inferenceと自由エネルギー原理文献間の計算的メタ分析です。プロジェクトはarXiv、Semantic Scholar、OpenAlexからの多ソースリテンションを使用し、LLMに基づく主張抽出をNanopublicationsに変換し、citation-weighted hypothesis scoring、NMFトピックモデリング、およびサブフィールド分類を行います。すべての71件のカスタマイズされた参照は、完全な引用情報とDOIリンクが付いたものです。

この引用書について

このページには、Active Inferenceメタ解析プロジェクトの完全な構造化出力が present されています。引用文献には、マニュアルソースから抽出された71件のカスタマイズ済み参照が含まれており、さらに全体的な分析：フィールド成長指標、LLMから抽出された主張に基づく仮説証拠スコア、citation network分析、NMFトピックモデリング、サブフィールド分類、コーラスカバー率統計、およびプロジェクトの品質と再現性データが含まれています。フルBibTeXソース、すべての出力データファイル、そしてコンパイルされたマニュアルは、GitHubで利用可能です。

View BibTeX source on GitHub Meta-analysis repository Meta-analysis document

範囲とカバー

この引用集は、自由エネルギー原理の基礎的研究（Friston 2006, 2010）、Active Inference教科書（Parr, Pezzulo & Friston 2022）、離散と連続状態空間形式の手法的進歩、深層Active Inference、ロボットと言語におけるActive Inference、そしてMarkov blanketsとFEPの科学的地位に関する批判的な議論を含んでいます。また、計算インフラストラクチャの参照も含まれています： nanopublications、知識グラフ、Semantic ScholarおよびOpenAlexプラットフォーム、LLMに基づく科学情報抽出などです。

次の最適な行動

Where to go next

View BibTeX source フィルタリングされたリソースグローバルディレクトリ学習と研究アクティブインファレンス

フィールドオーバラウンド

Active Inference 文献：2005-2026 年の 817 篇

アクティブインフェリエンスとフリーエネルギー原理の研究が2つの時代をカバーし、arXiv、Semantic Scholar、OpenAlexから取得されたコーパスです。

Growth metrics

Total papers: 817

CAGR: 20.4%

Doubling time: 2.8 years

Peak year: 2025 (123 papers)

Cumulative (2026): 817

Papers per year

2005 1

2006 0

2007 1

2008 4

2009 4

2010 6

2011 6

2012 12

2013 14

2014 13

2015 18

2016 20

2017 21

2018 32

2019 52

2020 61

2021 90

2022 94

2023 97

2024 99

2025 123

2026 49

コーパス評価

819 ペーパーズを検索・評価

全文文献集のカバーと可用性統計。

Coverage

Abstracts: 96.5%

Open access: 94.6%

Full-text PDF: 87.8%

Full-text sources

arxiv: 485

publisher: 157

none: 100

repository: 67

openalex: 10

Identifier coverage

doi: 420

arxiv_id: 485

s2_id: 0

openalex_id: 334

ハプソス・エビデンス

8つの核的仮説が文献全体で評価

各仮説は、LLMから抽出された主張を使用した引用加重証拠に基づいてスコア付けされました（ nanopublication）。スコアは、コーパス内の総合証拠を反映しています。

Morphogenesis

Evidence score 100%

24 supporting assertions

Active Inference Optimality

Evidence score 97%

291 supporting, 6 neutral, 2 contradicting assertions

Predictive Coding

Evidence score 94%

233 supporting, 24 neutral, 1 contradicting assertions

Clinical Utility

Evidence score 93%

23 supporting, 2 neutral assertions

Scalability

Evidence score 85%

108 supporting, 13 neutral assertions

Language & Active Inference

Evidence score 83%

31 supporting, 3 neutral assertions

Markov Blanket Realism

Evidence score 78%

12 supporting, 2 neutral, 4 contradicting assertions

FEP Universality

Evidence score 48%

281 supporting, 429 neutral, 1 contradicting assertions

subfieldの分布

コ퍼ス全体で8つの分野が Classified

タイトルと摘要に基づくキーワードベースのルールを使用して、論文を8つのサブフィールドカテゴリに分類しました。

Tools & Methods 170

Neuroscience 161

Robotics & Agents 136

Biology / Morphogenesis 135

Formal / Mathematical 64

Philosophy 60

Language 58

Psychiatry / Clinical 33

Total classified assignments: 817

トピックランドスケープ

5トピック抽出：NMF

非負行列因子分解 (NMF) を論文タイトルと要約の TF-IDF ベクトルに適用し、文献における五つのトピッククラスタを Revealed

Topic 1

energy (0.063), free (0.059), systems (0.05), states (0.048), fep (0.046)

Topic 2

agent (0.107), agents (0.05), environment (0.043), model (0.035), behavior (0.028)

Topic 3

predictive (0.061), cognitive (0.055), brain (0.046), processing (0.038), cognition (0.036)

Topic 4

active (0.06), inference (0.057), decision (0.041), agents (0.039), aif (0.036)

Topic 5

model (0.057), learning (0.052), data (0.036), state (0.033), inference (0.032)

citation network

817ノード、2176エッジ、29323参照

引用グラフは論文の参照リストから構築されました。PageRank、ハブと権威スコアがネットワーク内の最も影響力のある论文を特定します。

Network metrics

Nodes: 817

Edges: 2176

Density: 0.003264

Avg degree: 2.7

71カurationの参考文献67セクション

すべての参照は、DOI またはソースURLにリンクされています。BibTeX 源は GitHub 上で利用可能です。

Foundational FEP

The free-energy principle: a unified brain theory? Karl Friston (2010) Nature Reviews Neuroscience, 11, (2), 127--138. Nature Publishing Group · DOI: 10.1038/nrn2787
A free energy principle for the brain Karl Friston, James Kilner, Lee Harrison (2006) Journal of Physiology-Paris, 100, (1-3), 70--87. Elsevier · DOI: 10.1016/j.jphysparis.2006.10.001

Active Inference textbook

Active Inference: The Free Energy Principle in Mind, Brain, and Behavior Thomas Parr, Giovanni Pezzulo, Karl J Friston (2022) MIT Press

Da Costa et al. on active inference

Active inference on discrete state-spaces: A synthesis Lancelot Da Costa, Thomas Parr, Noor Sajid, Sebastijan Veselic, Victorita Neacsu, Karl Friston (2020) Journal of Mathematical Psychology, 99, 102447. Elsevier · DOI: 10.1016/j.jmp.2020.102447

Sajid et al. review

Active inference: demystified and compared Noor Sajid, Philip J Ball, Thomas Parr, Karl J Friston (2021) Neural Computation, 33, (3), 674--712. MIT Press · DOI: 10.1162/neco_a_01357

Smith et al. computational psychiatry

A step-by-step tutorial on active inference and its application to empirical data Ryan Smith, Karl J Friston, Christopher J Whyte (2022) Journal of Mathematical Psychology, 107, 102632. Elsevier · DOI: 10.1016/j.jmp.2021.102632

Deep active inference

Deep active inference agents using Monte-Carlo methods Zafeirios Fountas, Noor Sajid, Pedro AM Mediano, Karl Friston (2020) Advances in Neural Information Processing Systems, 33, 11662--11675.

Champion et al. tree search

Realizing active inference in variational message passing: The outcome-blind fixation of belief Th'e}ophile Champion, Howard Bowman, Peter Gr"unwald (2021) Neural Computation, 33, (10), 2762--2826. MIT Press · DOI: 10.1162/neco_a_01422

Nanopublications

Anatomy of a nanopublication Paul Groth, Andrew Gibson, Jan Velterop (2010) Information Services & Use, 30, (1-2), 51--56. IOS Press · DOI: 10.3233/ISU-2010-0613
Decentralized provenance-aware publishing with nanopublications Tobias Kuhn, Christine Chichester, Michael Krauthammer, N'u}ria Queralt-Rosinach, Ruben Verborgh, George Giannakopoulos, Axel-Cyrille Ngonga Ngomo, Michel Dumontier (2016) PeerJ Computer Science, 2, e78. PeerJ Inc. · DOI: 10.7717/peerj-cs.78
Trusty URIs: Verifiable, Immutable, and Permanent Digital Artifacts for Linked Data Tobias Kuhn, Michel Dumontier (2014) The Semantic Web--ISWC 2014, 395--410. Springer · DOI: 10.1007/978-3-319-11964-9_25

pymdp

pymdp: A Python library for active inference in discrete state spaces Conor Heins, Beren Millidge, Lancelot Da Costa, Stephen Mann, Karl Friston, Ozan Catal, Pablo Lanillos, Noor Sajid, Alexander Tschantz (2022) Journal of Open Source Software, 7, (73), 4098. The Open Journal · DOI: 10.21105/joss.04098

Semantic Scholar

The Semantic Scholar Open Data Platform Rodney Kinney, Chloe Anastasiades, Russell Authur, Isabelle Belber, Jonathan Blaschke, Regan Chiang, Jenna Coffey, Arman Feldman, Joshua Gruber, others (2023) arXiv preprint arXiv:2301.10140.

OpenAlex

OpenAlex: A fully-open index of scholarly works, authors, venues, institutions, and concepts Jason Priem, Heather Piwowar, Richard Orr (2022) arXiv preprint arXiv:2205.01833.

Markov blanket debate

The Emperor's New Markov Blankets Jelle Bruineberg, Krzysztof Dolega, Joe Dewhurst, Manuel Baltieri (2022) Behavioral and Brain Sciences, 45, e183. Cambridge University Press · DOI: 10.1017/S0140525X21002351

Predictive processing

Whatever next? Predictive brains, situated agents, and the future of cognitive science Andy Clark (2013) Behavioral and Brain Sciences, 36, (3), 181--204. Cambridge University Press · DOI: 10.1017/S0140525X12000477

Bayesian mechanics

On Bayesian mechanics: a physics of and by beliefs Dalton AR Sakthivadivel (2023) Interface Focus, 13, (3), 20220029. The Royal Society · DOI: 10.1098/rsfs.2022.0029

LLM + KG 2025 systematic reviews

Combining Knowledge Graphs and Large Language Models: A Systematic Literature Review Viviana Fernanda Quevedo Tumailli, others (2025) IEEE Access. IEEE
Unifying large language models and knowledge graphs: A roadmap Linhao Li, others (2024) IEEE Transactions on Knowledge and Data Engineering. IEEE

2025 tools

RxInfer.jl v4.0.0: Real-time and adaptive Bayesian inference Dmitry Bagaev, others (2025)

Active inference and artificial reasoning (replaces fabricated heins2024active)

Active inference and artificial reasoning Karl Friston, Lancelot Da Costa, Alexander Tschantz, Conor Heins, Christopher Buckley (2025) arXiv preprint arXiv:2512.21129. DOI: 10.48550/arXiv.2512.21129

AXIOM: AIF agents learning games in minutes

AXIOM: Learning to Play Games in Minutes with Expanding Object-Centric Models Conor Heins, Toon Van de Maele, Alexander Tschantz, Hampus Linander, Dimitrije Markovic, Tommaso Salvatori, Corrado Pezzato, Ozan Catal, Ran Wei, Magnus Koudahl, Marco Perin, Karl Friston, Tim Verbelen, Christopher Buckley (2025) arXiv preprint arXiv:2505.24784.

Collective behavior from surprise minimization

Collective behavior from surprise minimization Conor Heins, Beren Millidge, Daphne Demekas, Hrishit Basu, Noor Sajid, Karl Friston (2024) Proceedings of the National Academy of Sciences, 121, (17), e2320239121. DOI: 10.1073/pnas.2320239121

Millidge retrospective on Active Inference

A Retrospective on Active Inference Beren Millidge (2024)

The Missing Reward: AIF + LLMs

The Missing Reward: Active Inference in the Era of Experience Bo Wen (2025) arXiv preprint arXiv:2508.05619. DOI: 10.48550/arXiv.2508.05619

Morphogenesis and FEP

Morphogenesis as Bayesian inference: A variational approach to pattern formation and body-plan diversity in biology Franz Kuchling, Karl Friston, Georgi Georgiev, Michael Levin (2020) Physics of Life Reviews, 33, 88--108. Elsevier · DOI: 10.1016/j.plrev.2019.06.001

Active inference for language

Generative models, linguistic communication and active inference Karl J Friston, Thomas Parr, Yan Yufik, Noor Sajid, Cathy J Price, Emma Holmes (2020) Neuroscience & Biobehavioral Reviews, 118, 42--64. Elsevier · DOI: 10.1016/j.neubiorev.2020.07.005

Non-negative Matrix Factorization

Learning the parts of objects by non-negative matrix factorization Daniel D Lee, H Sebastian Seung (1999) Nature, 401, (6755), 788--791. Nature Publishing Group · DOI: 10.1038/44565

Vector space model / TF-IDF

A vector space model for automatic indexing Gerard Salton, Anita Wong, Chung-Shu Yang (1975) Communications of the ACM, 18, (11), 613--620. ACM · DOI: 10.1145/361219.361220

Greedy modularity community detection (Clauset-Newman-Moore)

Finding community structure in very large networks Aaron Clauset, Mark E. J. Newman, Cristopher Moore (2004) Physical Review E, 70, (6), 066111. American Physical Society · DOI: 10.1103/PhysRevE.70.066111

rdflib

rdflib: A Python library for working with RDF RDFLib Team (2023)

Active inference for robotics

Active inference in robotics and artificial agents: Survey and challenges Pablo Lanillos, Cristian Meo, Corrado Pezzato, Ajith Anil Meera, Mohamed Baioumy, Wataru Ohata, Alexander Tschantz, Beren Millidge, Martijn Wisse, Christopher L Buckley, Jun Lenz (2021) arXiv preprint arXiv:2112.01871.

Technological approach to morphogenesis

Technological approach to mind everywhere: An experimentally-grounded framework for understanding diverse bodies and minds Michael Levin (2022) Frontiers in Systems Neuroscience, 16, 768201. Frontiers · DOI: 10.3389/fnsys.2022.768201

Active Inference textbook (Friston 2017)

Active inference: A process theory Karl Friston, Thomas FitzGerald, Francesco Rigoli, Philipp Schwartenbeck, Giovanni Pezzulo (2017) Neural Computation, 29, (1), 1--49. MIT Press · DOI: 10.1162/NECO_a_00912

Deep active inference survey

Understanding the origin of information-seeking exploration in probabilistic objectives for control Beren Millidge, Alexander Tschantz, Christopher L Buckley (2021) arXiv preprint arXiv:2103.06859.

Cpp-AIF: C++ active inference for POMDPs

A C++ Implementation of Active Inference for POMDPs Francesco Gregoretti (2023) Neurocomputing, 562, 126888. Elsevier · DOI: 10.1016/j.neucom.2023.126888

Deep Active Inference (Millidge)

Deep Active Inference as Variational Policy Gradients Beren Millidge (2020) Journal of Mathematical Psychology, 96, 102348. Elsevier · DOI: 10.1016/j.jmp.2020.102348

Predictive coding approximates backprop

Predictive coding approximates backprop along arbitrary computation graphs Beren Millidge, Alexander Tschantz, Christopher L Buckley (2022) Neural Computation, 34, (6), 1329--1368. MIT Press · DOI: 10.1162/neco_a_01497

Action-oriented predictive processing

Learning action-oriented models through active inference Alexander Tschantz, Anil K Seth, Christopher L Buckley (2020) PLoS Computational Biology, 16, (4), e1007805. PLOS · DOI: 10.1371/journal.pcbi.1007805

Ollama local LLM inference

Ollama: Run Large Language Models Locally Ollama Team (2024)

Prior systematic literature analysis

The Free Energy Principle & Active Inference: a Systematic Literature Analysis Virginia Bleu Knight, RJ Cordes, Daniel Friedman (2022) Zenodo · DOI: 10.5281/zenodo.7449368

Visualization standards

Points of view: Color blindness Bang Wong (2011) Nature Methods, 8, (6), 441. Nature Publishing Group · DOI: 10.1038/nmeth.1618

Hohwy - The Predictive Mind

The Predictive Mind Jakob Hohwy (2013) Oxford University Press · DOI: 10.1093/acprof:oso/9780199682737.001.0001

Ramstead et al. - Answering Schr\"odinger's question

Answering Schr"odinger's question: A free-energy formulation Maxwell JD Ramstead, Paul B Badcock, Karl J Friston (2018) Physics of Life Reviews, 24, 1--16. Elsevier · DOI: 10.1016/j.plrev.2017.09.001

Pezzulo et al. - Active inference and robotics

Active Inference, homeostatic regulation and adaptive behavioural control Giovanni Pezzulo, Francesco Rigoli, Karl Friston (2015) Progress in Neurobiology, 134, 17--35. Elsevier · DOI: 10.1016/j.pneurobio.2015.09.001

HITS Centrality

Authoritative sources in a hyperlinked environment Jon M Kleinberg (1999) Journal of the ACM (JACM), 46, (5), 604--632. ACM New York, NY, USA · DOI: 10.1145/324133.324140

LeCun EBM tutorial

A tutorial on energy-based learning Yann LeCun, Sumit Chopra, Raia Hadsell, Marc'Aurelio Ranzato, Fu Jie Huang (2006) Predicting Structured Data, 191--246. MIT Press

Contrastive divergence

Training products of experts by minimizing contrastive divergence Geoffrey E Hinton (2002) Neural Computation, 14, (8), 1771--1800. MIT Press · DOI: 10.1162/089976602760128018

Helmholtz machine

The Helmholtz machine Peter Dayan, Geoffrey E Hinton, Radford M Neal, Richard S Zemel (1995) Neural Computation, 7, (5), 889--904. MIT Press · DOI: 10.1162/neco.1995.7.5.889

Variational autoencoder

Auto-encoding variational Bayes Diederik P Kingma, Max Welling (2014) Proceedings of the 2nd International Conference on Learning Representations (ICLR).

Metacognitive AIF and consciousness

How do inner screens enable imaginative experience? A metacognitive active inference account Christopher J Whyte, Ryan Smith, Jakob Hohwy (2025) Neuroscience of Consciousness, 2025, (1), niaf009. Oxford University Press · DOI: 10.1093/nc/niaf009

Free Energy Projective Simulation

Free Energy Projective Simulation (FEPS): Active Inference with Interpretable Policy Graphs Marius Pazem, Simon Hangl, Justus Piater (2024) Workshop on Bridging the Gap Between Practice and Theory in Deep Learning, ICML 2024.

AIF for smart building energy control

Active Inference for Energy Control and Planning under Partial Observability Morteza Nazemi, Sanket Bhatt, Zafeirios Fountas (2025) arXiv preprint arXiv:2503.07772. DOI: 10.48550/arXiv.2503.07772

nanopub-js JavaScript library

nanopub-js: JavaScript library for nanopublications Knowledge Pixels (2026)

Publication bias

Publication decisions and their possible effects on inferences drawn from tests of significance—or vice versa Theodore D. Sterling (1959) Journal of the American Statistical Association, 54, (285), 30--34. Taylor & Francis · DOI: 10.1080/01621459.1959.10501497

Falsifiability critique of the FEP

Free energy: a user's guide Matteo Colombo, Peggy Seri\`es (2021) Biology & Philosophy, 36, (2), 1--35. Springer · DOI: 10.1007/s10539-021-09788-0

Predictive coding foundational paper: Rao & Ballard 1999

Predictive coding in the visual cortex: a functional interpretation of some extra-classical receptive-field effects Rajesh P N Rao, Dana H Ballard (1999) Nature Neuroscience, 2, (1), 79--87. Nature Publishing Group · DOI: 10.1038/4580

LLM extraction benchmarking survey

A survey of scientific information extraction with large language models Tianyi Liang, Weicheng Zhang, Chao Lin, others (2024) arXiv preprint arXiv:2401.01512.

RAG-Knowledge Graph convergence survey

A survey on RAG meeting LLMs: towards Retrieval-Augmented large language model Wenqi Fan, Yujuan Ding, Liangbo Ning, Shijie Wang, Hengyun Li, Dawei Yin, Tat-Seng Chua, Qing Li (2024) arXiv preprint arXiv:2405.06211.

Discovery Engine and Knowledge Synthesis

The Discovery Engine: A Framework for AI-Driven Synthesis and Navigation of Scientific Knowledge Landscapes Vladimir Baulin, Austin Cook, Daniel Friedman, Janna Lumiruusu, Andrew Pashea, Shagor Rahman, Benedikt Waldeck (2025) arXiv preprint arXiv:2505.17500. DOI: 10.48550/arXiv.2505.17500

Namjoshi 2026 Textbook

Fundamentals of Active Inference: Principles, Algorithms, and Applications of the Free Energy Principle for Engineers Sanjeev V Namjoshi (2026) MIT Press

Namjoshi AIF FEP DB

aif-fep-db: A database of publications related to active inference and the free energy principle Sanjeev V Namjoshi (2026)

MDPI Entropy ActiveInference.jl

Introducing ActiveInference.jl: A Julia Library for Simulation and Parameter Estimation with Active Inference Models Samuel Nehrer, others (2025) Entropy, 27, (1), 62. MDPI · DOI: 10.3390/e27010062

ResNei: Research Neighbourhood

ResNei: Solution Design Document Janna Lumiruusu, Daniel Friedman, Shagor Rahman, Vladimir Baulin, Andrew Pashea (2025) DOI: 10.5281/zenodo.16753709

FAIR Data Principles

The FAIR Guiding Principles for Scientific Data Management and Stewardship Mark D. Wilkinson, Michel Dumontier, IJsbrand Jan Aalbersberg, Gabrielle Appleton, Myles Axton, Arie Baak, Niklas Blomberg, Jan-Willem Boiten, Luiz Bonino da Silva Santos, Philip E. Bourne, others (2016) Scientific Data, 3, 160018. Nature Publishing Group · DOI: 10.1038/sdata.2016.18

Decentralized Science

A Guide to DeSci, the Latest Web3 Movement Sarah Hamburg (2022) Future.

Cognitive Load Theory

Cognitive Load Theory John Sweller, Paul Ayres, Slava Kalyuga (2011) Explorations in the Learning Sciences, Instructional Systems and Performance Technologies. Springer · DOI: 10.1007/978-1-4419-8126-4

Citizen Science

Citizen Science: A Developing Tool for Expanding Science Knowledge and Scientific Literacy Rick Bonney, Caren B. Cooper, Janis Dickinson, Steve Kelling, Tina Phillips, Kenneth V. Rosenberg, Jennifer Shirk (2009) BioScience, 59, (11), 977--984. Oxford University Press · DOI: 10.1525/bio.2009.59.11.9

Universal Design for Learning

Universal Design for Learning David H. Rose, Anne Meyer (2000) Journal of Special Education Technology, 15, (1), 67--70. DOI: 10.1177/016264340001500108

Article / manuscript describing the template/ system

A template/ approach to Reproducible Generative Research: Architecture and Ergonomics from Configuration through Publication Daniel Ari Friedman (2026) Zenodo. DOI: 10.5281/zenodo.19139090

Software framework (kept as @misc — plainnat.bst does not define @software)

docxology/template Daniel Ari Friedman (2026) DOI: 10.5281/zenodo.19139089

プロジェクト品質

再現性と Validation

メタ解析パイプラインは完全にテストと検証されています。すべてのゲートが公開される前に出力はすべて通過します。

Test suite

Tests passed: 558 / 558

Coverage: 94.8%

Pipeline stages: 7

Validation

All checks passed: Yes

Total checks: 4

Pipeline duration: 472.438

Project links

Repository ↗

BibTeX source ↗

Full manuscript ↗

キーの表面

参考文献一覧

メタ分析プロジェクト

全メタ解析コードベース、パイプライン、マニュアルソース。

Repository

BibTeXソース

canonical references.bib ファイルがこのページを drivs する。

references.bib

発行された論文

Journal article (2022) by O'Connor et al., archived on Zenodo.

zenodoresearch

Learning and Research Ecosystem

リポジトリ

文献